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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gfpt1, glutamine fructose-6-phosphate transaminase 1
Sequence ID:NM_013528
Entrez Gene ID:14583
Ensembl ID:ENSMUSG00000029992

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 D1|6 35.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 87042890 - 87088241

 Exon Info From UCSC:
NM_013528

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4191553Full LengthBC010516glutamine fructose-6-phosphate transaminase 1
6742987Full LengthBC050762glutamine fructose-6-phosphate transaminase 1
3589599IncompleteBC002283glutamine fructose-6-phosphate transaminase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038556  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013528 NP_038556   GATase_2
SIS

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U00932 AAC27348 P47856 EC 2.6.1.16
BC002283 AAH02283 P47856 EC 2.6.1.16
BC010516 AAH10516 P47856 EC 2.6.1.16
BC050762 AAH50762 P47856 EC 2.6.1.16
AF334736 AAK15341 P47856 EC 2.6.1.16
AK019852 BAB31882 P47856 EC 2.6.1.16

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gfpt1 NP_038556 R.norvegicus Gfpt1 297417   NP_001005879 100
H.sapiens GFPT1 2673 Gene Info NP_002047 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)