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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gfra4, glial cell line derived neurotrophic factor family receptor alpha 4
Sequence ID:NM_001136063
NM_001271001
NM_001271002
NM_020014
Entrez Gene ID:14588
Ensembl ID:ENSMUSG00000027316

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 F1|2 73.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 131039645 - 131041511

 Exon Info From UCSC:
NM_001136063
NM_020014

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40040202Full LengthBC141874glial cell line derived neurotrophic factor family receptor alpha 4
40040201IncompleteBC141873glial cell line derived neurotrophic factor family receptor alpha 4
40040205IncompleteBC111808glial cell line derived neurotrophic factor family receptor alpha 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064398  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001136063 NP_001129535    
NM_001271001 NP_001257930 Q9JJT2  
NM_001271002 NP_001257931    
NM_020014 NP_064398   GDNF

Related Sequences

 
mRNAGenPeptSwissProt
BC111808 AAI11809 Q2M2Q9
BC141873 AAI41874 A5D8Z1
BC141874 AAI41875 A2AP45
AB041809 BAA95116 Q9JJ81
AK090192 BAC41129 Q8C1V7
AJ276514 CAB89687 Q9JJT2
AJ276515 CAB89688 Q9JJT2
AJ276516 CAB89689 Q9JJT2
AJ276870 CAB89690 Q9JJT2
AJ276871 CAB89691 Q9JJT2
AJ276872 CAB89692 Q9JJT2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gfra4 NP_064398 R.norvegicus Gfra4 66023   NP_076457 88
H.sapiens GFRA4 64096 Gene Info NP_071422 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)