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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Sdhc, succinate dehydrogenase complex, subunit C, integral membrane protein
Sequence ID:NM_025321
Entrez Gene ID:66052
Ensembl ID:ENSMUSG00000058076

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H3|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 171129164 - 171150602

NM_025321 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2749173059288173060035
750913173066123173066286
914975173068824173068885
9761077173073688173073789
10781134173075886173075942
11351179173080689173080733

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2810852Full LengthBC005779succinate dehydrogenase complex, subunit C, integral membrane protein
30445339Full LengthBC083091succinate dehydrogenase complex, subunit C, integral membrane protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079597  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025321 NP_079597 Q9CZB0 Sdh_cyt

Related Sequences

 
mRNAGenPeptSwissProt
BC005779 AAH05779 Q9CZB0
BC083091 AAH83091 Q5XK33
AK002459 BAB22116 Q9CZB0
AK012818 BAB28491 Q9CZB0
AK032458 BAC27878 Q9CZB0
AK135503 BAE22557 Q9CZB0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sdhc NP_079597 R.norvegicus Sdhc 289217   NP_001005534 86
H.sapiens SDHC 6391 Gene Info NP_002992 80
D.melanogaster SdhC 41340   NP_650047 44
A.gambiae AgaP_AGAP010672 1272475   XP_311387 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)