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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Oxsm, 3-oxoacyl-ACP synthase, mitochondrial
Sequence ID:NM_027695
Entrez Gene ID:71147
Ensembl ID:ENSMUSG00000021786

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 A2|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 16238686 - 16243327

NM_027695 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
124121707117217073583
241334201707430417075311
342137521708199017082321

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40106281Full LengthBC1197933-oxoacyl-ACP synthase, mitochondrial
40106282Full LengthBC1180513-oxoacyl-ACP synthase, mitochondrial

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081971  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_027695 NP_081971 Q9D404 EC 2.3.1.41 ketoacyl-synt
Ketoacyl-synt_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC118051 AAI18052 Q148P2  
BC119793 AAI19794 Q148P2  
AK016905 BAB30490 Q9D404 EC 2.3.1.41
AK083617 BAC38969 Q9D404 EC 2.3.1.41
AK084829 BAC39286 Q9D404 EC 2.3.1.41

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Oxsm NP_081971 R.norvegicus Oxsm 289934   NP_001093978 94
H.sapiens OXSM 54995 Gene Info NP_060367 85
A.gambiae AgaP_AGAP002809 1273152   XP_312104 57
D.melanogaster CG12170 40692   NP_649565 56
A.thaliana AT2G04540 814996   NP_178533 54
N.crassa NCU00056 3871946   XP_955799 53
S.pombe SPBC887.13c 2541226   NP_596487 51
S.cerevisiae CEM1 856790   NP_010983 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)