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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Acot1, acyl-CoA thioesterase 1
Sequence ID:NM_012006
Entrez Gene ID:26897
Ensembl ID:ENSMUSG00000072949

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 D1|12 33.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 83990463 - 84016061

NM_012006 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14658535045185350915
4666688535532885355530
66915588535772985358618

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5100478Full LengthBC028261acyl-CoA thioesterase 1
3484698IncompleteBC003911acyl-CoA thioesterase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036136  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_012006 NP_036136 O55137 EC 3.1.2.2 Bile_Hydr_Trans

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC003911 AAH03911 Q99L15  
BC028261 AAH28261 O55137 EC 3.1.2.2
Y14004 CAA74327 O55137 EC 3.1.2.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Acot1 NP_036136 R.norvegicus Acot1 50559   NP_112605 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)