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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Clec2d, C-type lectin domain family 2, member d
Sequence ID:NM_053109
Entrez Gene ID:93694
Ensembl ID:ENSMUSG00000030157

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 129180621 - 129186534

NM_053109 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1126129130639129130764
127252129133109129133234
253431129134152129134330
432538129134795129134901
5391206129135884129136551

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40040181Full LengthBC106776C-type lectin domain family 2, member d

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444339  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_053109 NP_444339 Q91V08 Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC106776 AAI06777 Q91V08
AF321553 AAK50881 Q91V08
AF350409 AAK70357 Q91V08
AY320031 AAQ16529 Q91V08
HQ875062 ADX42725 F5BFH0
HQ713439 AEP22559 F5BFH0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clec2d NP_444339 M.musculus Clec2g 70809 Gene Info NP_081838 82
M.musculus Clec2i 93675 Gene Info NP_064653 75
H.sapiens CLEC2D 29121 Gene Info NP_037401 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)