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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cdc23, CDC23 cell division cycle 23
Sequence ID:NM_178347
Entrez Gene ID:52563
Ensembl ID:ENSMUSG00000024370

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 B1|18 17.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 34632778 - 34651718

 Exon Info From UCSC:
NM_178347

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6813730Full LengthBC059013CDC23 (cell division cycle 23, yeast, homolog)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848124  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178347 NP_848124   TPR_1
APC8
TPR_2

Related Sequences

 
mRNAGenPeptSwissProt
BC059013 AAH59013 Q8BGZ4
AK031459 BAC27415 Q8BGZ4
AK038523 BAC30026 Q8BGZ4
AK044478 BAC31944 Q8BXQ5
AK048246 BAC33283 Q8BGZ4
AK081461 BAC38224 Q8BGZ4
AK169677 BAE41298 Q3TEF0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cdc23 NP_848124 R.norvegicus Cdc23 291689   NP_001094129 100
H.sapiens CDC23 8697 Gene Info NP_004652 95
D.melanogaster cdc23 35315   NP_610036 50
A.gambiae AgaP_AGAP009880 1279299   XP_319000 49
A.thaliana APC8 823970   NP_190398 47
D.melanogaster CG31687 318886   NP_001163022 45
N.crassa NCU01174 3877736   XP_961540 44
S.pombe cut23 2542880   NP_593300 42
S.cerevisiae CDC23 856571   NP_012036 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)