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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1
Sequence ID:NM_008576
Entrez Gene ID:17250
Ensembl ID:ENSMUSG00000023088

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 A1|16

Chromosomal Position (from UCSC)

Chromosomal Position:16: 14361595 - 14473568

 Exon Info From UCSC:
NM_008576

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30943198Full LengthBC090617ATP-binding cassette, sub-family C (CFTR/MRP), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032602  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008576 NP_032602 O35379 ABC_tran
ABC_membrane

Related Sequences

 
mRNAGenPeptSwissProt
AF022908 AAB80938 O35379
AF213389 AAF31429 Q9JL41
BC090617 AAH90617 A5D6P3
AK029876 BAC26654 O35379
AK045109 BAC32226 Q8BRD0
AK049174 BAC33586 Q8C7V6
AK150015 BAE29240 Q3UDM1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Abcc1 NP_032602 R.norvegicus Abcc1 24565   NP_071617 95
H.sapiens ABCC1 4363 Gene Info NP_004987 88
C.elegans mrp-2 180408   NP_508121 48
C.elegans mrp-1 180409   NP_741702 48
S.cerevisiae YCF1 851713   NP_010419 45
N.crassa NCU09012 3874293   XP_958146 43
S.pombe abc2 2543193   NP_593943 41
S.pombe abc3 2540937   NP_595055 39
A.thaliana MRP8 820497   NP_187916 37
A.thaliana MRP7 820498   NP_187917 36
A.thaliana MRP3 820496   NP_187915 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta