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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Prmt5, protein arginine N-methyltransferase 5
Sequence ID:NM_013768
Entrez Gene ID:27374
Ensembl ID:ENSMUSG00000023110

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, synovium, t-cell, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14 C1|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 54507631 - 54517338

 Exon Info From UCSC:
NM_013768

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5321370Full LengthBC023905protein arginine N-methyltransferase 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038796  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_013768 NP_038796 Q8CIG8 EC 2.1.1.125 PRMT5

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF167573 AAF04503 Q8CIG8 EC 2.1.1.125
BC023905 AAH23905 Q8CIG8 EC 2.1.1.125
AK014213 BAB29209 Q9CRT9  
AK132414 BAE21155 Q8CIG8 EC 2.1.1.125
AK165165 BAE38057 Q8CIG8 EC 2.1.1.125

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prmt5 NP_038796 R.norvegicus Prmt5 364382   NP_001102337 99
H.sapiens PRMT5 10419 Gene Info NP_006100 98
A.thaliana SKB1 829240   NP_194841 50
A.gambiae AgaP_AGAP009048 1280006   XP_319800 46
D.melanogaster csul 36809   NP_477184 42
S.pombe skb1 2540099   NP_595936 39
N.crassa NCU01613 3872672   XP_956524 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)