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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. D17Wsu92e, DNA segment, Chr 17, Wayne State University 92, expressed
Sequence ID:NM_001033279
NM_001044719
Entrez Gene ID:224647
Ensembl ID:ENSMUSG00000056692

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pineal gland, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A3.3|17 13.0

Chromosomal Position (from UCSC)

Chromosomal Position:17: 27751236 - 27752901

 Exon Info From UCSC:
NM_001033279
NM_001044719

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860592Full LengthBC137573DNA segment, Chr 17, Wayne State University 92, expressed
8860595Full LengthBC137576DNA segment, Chr 17, Wayne State University 92, expressed
9053961Full LengthBC145403DNA segment, Chr 17, Wayne State University 92, expressed
40130601Full LengthBC132324DNA segment, Chr 17, Wayne State University 92, expressed
40130603Full LengthBC132326DNA segment, Chr 17, Wayne State University 92, expressed

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033279 NP_001028451 Q3TT38  
NM_001044719 NP_001038184    
NM_001271511 NP_001258440    

Related Sequences

 
mRNAGenPeptSwissProt
BC132324 AAI32325 Q3TT38
BC132326 AAI32327 Q3TT38
BC137573 AAI37574 B2KF54
BC137576 AAI37577 B2KF54
BC145403 AAI45404 Q3TT38
AK161603 BAE36487 Q3TT38

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus D17Wsu92e NP_001028451 H.sapiens C6orf106 64771 Gene Info NP_077270 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)