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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Csrp1, cysteine and glycine-rich protein 1
Sequence ID:NM_007791
Entrez Gene ID:13007
Ensembl ID:ENSMUSG00000026421

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1 E4|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 135720060 - 135751453

NM_007791 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
178137625773137625850
79191137635976137636088
192360137641835137642003
361490137643296137643425
491584137647141137647234
5851770137647620137648805

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2654089Full LengthBC006912cysteine and glycine-rich protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031817  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007791 NP_031817 P97315
Q4FJX4
LIM

Related Sequences

 
mRNAGenPeptSwissProt
AF092921 AAD19352 P97315
Q4FJX4
BC006912 AAH06912 P97315
Q4FJX4
D88793 BAA13723 P97315
Q4FJX4
AK077787 BAC37009 P97315
Q4FJX4
AK087436 BAC39873 P97315
Q4FJX4
AK147089 BAE27669 P97315
Q4FJX4
AK149025 BAE28722 P97315
Q4FJX4
AK168922 BAE40735 P97315
Q4FJX4
AK168984 BAE40784 P97315
Q4FJX4
AK169720 BAE41330 P97315
Q4FJX4
CT010278 CAJ18486 P97315
Q4FJX4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Csrp1 NP_031817 H.sapiens CSRP1 1465 Gene Info NP_001180499 99
R.norvegicus Csrp1 29276   NP_058844 99
A.gambiae AgaP_AGAP012305 1280389   XP_551886 52
D.melanogaster Mlp84B 40849   NP_477122 52
C.elegans mlp-1 175847   NP_498301 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)