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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Bcor, BCL6 interacting corepressor
Sequence ID:NM_001168321
NM_029510
NM_175044
NM_175045
NM_175046
Entrez Gene ID:71458
Ensembl ID:ENSMUSG00000040363

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X|X A1.2

Chromosomal Position (from UCSC)

Chromosomal Position:X: 12037301 - 12047634

 Exon Info From UCSC:
NM_001168321
NM_029510
NM_175044
NM_175045
NM_175046

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6412868Full LengthBC058656BCL6 interacting corepressor
1379440IncompleteBC038637Bcl6 interacting corepressor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083786  NP_778210  NP_778209  NP_778211  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001168321 NP_001161793    
NM_029510 NP_083786 Q8CGN4 Ank
NM_175044 NP_778209   Ank
NM_175045 NP_778210   Ank
NM_175046 NP_778211   Ank

Related Sequences

 
mRNAGenPeptSwissProt
BC058656 AAH58656 Q8CGN4
AY161170 AAN85318 Q8CGN4
AY161171 AAN85319 Q8CGN4
AY161172 AAN85320 Q8CGN4
AY161173 AAN85321 Q8CGN4
AK053309 BAC35338 Q8CGN4
AK129398 BAC98208 Q8CGN4
AK086385 BAE43390 Q3V2W5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bcor NP_083786 R.norvegicus Bcor 317346   XP_002730239 96
H.sapiens BCOR 54880 Gene Info NP_001116857 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)