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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nabp1, nucleic acid binding protein 1
Sequence ID:NM_028696
Entrez Gene ID:109019
Ensembl ID:ENSMUSG00000026107

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1|1 C1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 51471196 - 51477918

NM_028696 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
119245152633151528254
192519765152917251529223
197720525152984951529924
205321245153137751531448
212522635153432151534459
226428385153466851535242

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6486629Full LengthBC095967oligonucleotide/oligosaccharide-binding fold containing 2A
40130200Full LengthBC131923oligonucleotide/oligosaccharide-binding fold containing 2A
40130809Full LengthBC132532oligonucleotide/oligosaccharide-binding fold containing 2A
4954817IncompleteBC027371oligonucleotide/oligosaccharide-binding fold containing 2A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082972  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028696 NP_082972 Q8BGW5 tRNA_anti

Related Sequences

 
mRNAGenPeptSwissProt
BC027371 AAH27371 Q8R2P2
BC095967 AAH95967 Q8BGW5
BC131923 AAI31924 Q8BGW5
BC132532 AAI32533 Q8BGW5
AY880264 AAX68444 Q8BGW5
AK028886 BAC26173 Q8BGW5
AK028936 BAC26201 Q8BGW5
AK049396 BAC33732 Q8BGW5
AK083915 BAC39059 Q8BGW5
AK163613 BAE37421 Q8BGW5
AK166300 BAE38689 Q8BGW5
AK167541 BAE39608 Q3TJ87
AK167652 BAE39703 Q8BGW5
AK015312 BAE43243 Q8BGW5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Obfc2a NP_082972 R.norvegicus Obfc2a 363227   NP_001014238 94
H.sapiens OBFC2A 64859 Gene Info NP_001026886 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)