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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pebp1, phosphatidylethanolamine binding protein 1
Sequence ID:NM_018858
Entrez Gene ID:23980
Ensembl ID:ENSMUSG00000032959

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5 63.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 117282652 - 117287558

NM_018858 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
36850117732659117733473
851951117735729117735829
9521061117736143117736252
10621217117737417117737572

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3257403Full LengthBC008169phosphatidylethanolamine binding protein 1
5362125Full LengthBC083063phosphatidylethanolamine binding protein 1
30359654Full LengthBC089332phosphatidylethanolamine binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061346  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018858 NP_061346 P70296 PBP

Related Sequences

 
mRNAGenPeptSwissProt
U43206 AAB06983 P70296
AF300422 AAG25635 Q5EBQ2
P70296
BC008169 AAH08169 Q5EBQ2
P70296
BC083063 AAH83063 Q5EBQ2
P70296
BC089332 AAH89332 Q5EBQ2
P70296
AB046417 BAB03276 Q5EBQ2
P70296
AK088212 BAC40214 Q5EBQ2
P70296
AK143897 BAE25588 Q5EBQ2
P70296
AK149815 BAE29101 Q5EBQ2
P70296
AK159842 BAE35420 Q5EBQ2
P70296
AK168790 BAE40623 Q3TGC5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pebp1 NP_061346 R.norvegicus Pebp1 29542   NP_058932 93
H.sapiens PEBP1 5037 Gene Info NP_002558 86
D.melanogaster CG10298 40779   NP_649643 60
A.thaliana E12A11 838390   NP_173250 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)