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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mpc2, mitochondrial pyruvate carrier 2
Sequence ID:NM_027430
Entrez Gene ID:70456
Ensembl ID:ENSMUSG00000026568

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1|1 H2

Chromosomal Position (from UCSC)

Chromosomal Position:1: 165461259 - 165481119

NM_027430 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1304167391338167391641
305345167405084167405124
346430167408351167408435
431542167409597167409708
543854167411033167411344

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3501265Full LengthBC018324brain protein 44

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081706  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027430 NP_081706 Q9D023 UPF0041

Related Sequences

 
mRNAGenPeptSwissProt
BC018324 AAH18324 Q9D023
AK011889 BAB27898 Q9D023
AK002233 BAC24983 Q9D023
AK151522 BAE30471 Q9D023

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Brp44 NP_081706 H.sapiens BRP44 25874 Gene Info NP_001137146 94
D.melanogaster CG9399 41157   NP_001163571 59
C.elegans F53F10.3 171957   NP_491234 57
A.thaliana AT4G22310 828326   NP_193962 55
S.cerevisiae FMP43 853158   NP_011759 55
D.melanogaster CG9396 41156   NP_649912 54
S.cerevisiae YHR162W 856567   NP_012032 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)