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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gosr2, golgi SNAP receptor complex member 2
Sequence ID:NM_019650
Entrez Gene ID:56494
Ensembl ID:ENSMUSG00000020946

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E1|11 62.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 103679235 - 103697658

NM_019650 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
22549103538163103540710
25502690103545105103545245
26912823103547895103548027
28242932103548838103548946
29332997103550568103550632
29983078103558943103559023

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3601627Full LengthBC008525golgi SNAP receptor complex member 2
6485874Full LengthBC051253golgi SNAP receptor complex member 2
1449054IncompleteBC038879golgi SNAP receptor complex member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062624  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019650 NP_062624 O35166 V-SNARE

Related Sequences

 
mRNAGenPeptSwissProt
AF007550 AAB82653 O35166
BC008525 AAH08525 O35166
BC051253 AAH51253 O35166
AK005697 BAB24194 O35166
AK013052 BAB28622 O35166
AK150004 BAE29231 O35166

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gosr2 NP_062624 R.norvegicus Gosr2 64154   NP_113873 96
H.sapiens GOSR2 9570 Gene Info NP_004278 88
A.gambiae AgaP_AGAP003800 1271538   XP_310356 47
D.melanogaster membrin 38614   NP_647960 44
C.elegans gosr-2.1 181891   NP_509586 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)