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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Scarf2, scavenger receptor class F, member 2
Sequence ID:NM_153790
Entrez Gene ID:224024
Ensembl ID:ENSMUSG00000012017

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 A3|16

Chromosomal Position (from UCSC)

Chromosomal Position:16: 17797314 - 17808292

 Exon Info From UCSC:
NM_153790

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40047931Full LengthBC139758scavenger receptor class F, member 2
6402375IncompleteBC059226scavenger receptor class F, member 2
6402375IncompleteBC060084scavenger receptor class F, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_722485  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153790 NP_722485 P59222
Q58A84
Laminin_EGF
EGF_2

Related Sequences

 
mRNAGenPeptSwissProt
BC139758 AAI39759 Q58A84
AF522197 AAN45862 P59222
Q58A84
AB024432 BAD93344 P59222
Q58A84

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Scarf2 NP_722485 R.norvegicus Scarf2 287949   NP_001099334 96
H.sapiens SCARF2 91179 Gene Info NP_699165 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)