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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Dynlt1b, dynein light chain Tctex-type 1B
Sequence ID:NM_009342
Entrez Gene ID:21648
Ensembl ID:ENSMUSG00000096255

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A1|17 3.1 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 6430172 - 6432639

NM_009342 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
112764292596429385
12816964310276431068
17029364341556434278
29437164346176434694
37277064350446435442

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5684255Full LengthBC043018dynein light chain Tctex-type 1
6703917Full LengthBC089472dynein light chain Tctex-type 1
6740486Full LengthBC087868dynein light chain Tctex-type 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033368  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009342 NP_033368 P51807 Tctex-1

Related Sequences

 
mRNAGenPeptSwissProt
M25825 AAA40408 P51807
BC043018 AAH43018 P51807
BC089472 AAH89472 Q5EBK8
AK004520 BAB23343 Q9CT63
AK133788 BAE21842 P51807
AK153971 BAE32288 P51807

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Dynlt1b NP_033368 M.musculus Dynlt1f 100040531 Gene Info NP_001160099 100
M.musculus Dynlt1d 100040603   XP_001475667 100
M.musculus Dynlt1c 100040563 Gene Info NP_001160102 100
M.musculus Dynlt1a 100310872 Gene Info NP_001160101 100
M.musculus Dynlt1e 100040631 Gene Info XP_001475796 100
R.norvegicus Dynlt1 83462   NP_112608 96
H.sapiens DYNLT1 6993 Gene Info NP_006510 94
A.gambiae AgaP_AGAP001229 1281942   XP_321929 76
D.melanogaster Dlc90F 42199   NP_477356 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)