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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nkx6-1, NK6 homeobox 1
Sequence ID:NM_144955
Entrez Gene ID:18096
Ensembl ID:ENSMUSG00000035187

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E4|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 101659196 - 101664711

NM_144955 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14485102088215102088686
486658102090852102091024
6591808102092580102093729

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861038Full LengthBC138019NK6 homeobox 1
8861039Full LengthBC138020NK6 homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_659204  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_144955 NP_659204 Q99MA9 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC138019 AAI38020 Q99MA9
BC138020 AAI38021 Q99MA9
AF357883 AAK37567 Q99MA9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nkx6-1 NP_659204 R.norvegicus Nkx6-1 65193   NP_113925 100
H.sapiens NKX6-1 4825 Gene Info NP_006159 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)