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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Atp6v0d2, ATPase, H+ transporting, lysosomal V0 subunit D2
Sequence ID:NM_175406
Entrez Gene ID:242341
Ensembl ID:ENSMUSG00000028238

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 A3|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 19876848 - 19922522

NM_175406 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1615581980398419805526
155916331980715119807225
163418101980842219808598
181118881981445419814531
188919681981589019815969
196921471981782419818002
214823191983773319837904
232025181984951419849712

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30504725Full LengthBC087899ATPase, H+ transporting, lysosomal V0 subunit D2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_780615  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175406 NP_780615 Q80SY3 vATP-synt_AC39

Related Sequences

 
mRNAGenPeptSwissProt
BC087899 AAH87899 Q80SY3
AY145896 AAN61104 Q80SY3
AY517482 AAR99405 Q80SY3
AK075745 BAC35925 Q80SY3
AK089507 BAC40907 Q80SY3
AB088358 BAC57951 Q80SY3
AK170072 BAE41545 Q80SY3
AK170405 BAE41772 Q80SY3
AK170578 BAE41890 Q80SY3
AK170659 BAE41942 Q80SY3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp6v0d2 NP_780615 R.norvegicus Atp6v0d2 297932   NP_001011972 98
H.sapiens ATP6V0D2 245972 Gene Info NP_689778 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)