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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mecr, mitochondrial trans-2-enoyl-CoA reductase
Sequence ID:NM_025297
Entrez Gene ID:26922
Ensembl ID:ENSMUSG00000028910

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D2.3|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 131843470 - 131867767

NM_025297 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1208131399385131399592
209306131409630131409727
307438131410499131410630
439582131413671131413814
583685131416675131416777
686788131417690131417792
789862131418832131418905
863923131420971131421031
924996131421170131421242
9971337131423361131423701

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3488760Full LengthBC003864mitochondrial trans-2-enoyl-CoA reductase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079573  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_025297 NP_079573 Q9DCS3 EC 1.3.1.38 ADH_zinc_N
ADH_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC003864 AAH03864 Q9DCS3 EC 1.3.1.38
AK002533 BAB22169 Q9DCS3 EC 1.3.1.38

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mecr NP_079573 R.norvegicus Mecr 29470   NP_058905 94
H.sapiens MECR 51102 Gene Info NP_057095 82
D.melanogaster CG16935 36540   NP_610914 51
A.gambiae AgaP_AGAP011834 1280815   XP_320682 49
C.elegans W09H1.5 174963   NP_496800 47
A.thaliana AT3G45770 823720   NP_566881 47
N.crassa NCU00655 3881920   XP_965795 45
S.pombe etr1 2542100   NP_594891 44
S.cerevisiae ETR1 852314   NP_009582 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)