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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Setd7, SET domain containing (lysine methyltransferase) 7
Sequence ID:NM_080793
Entrez Gene ID:73251
Ensembl ID:ENSMUSG00000037111

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 C|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 51521299 - 51560604

NM_080793 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
161705131923951325408
617163285133076651330923
632964465133399251334109
644765285133689651336977
652967185134038751340576
671969205134655351346754
692170505135415651354285
705173565136443951364744

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30007831Full LengthBC050190SET domain containing (lysine methyltransferase) 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_542983  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_080793 NP_542983 Q8VHL1 EC 2.1.1.43 SET
MORN

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC050190 AAH50190 Q8VHL1 EC 2.1.1.43
AF448509 AAL56578 Q8VHL1 EC 2.1.1.43
AK048924 BAC33493 Q8VHL1 EC 2.1.1.43
AK129428 BAC98238 Q8VHL1 EC 2.1.1.43
AK147413 BAE27897 Q8VHL1 EC 2.1.1.43
AK147422 BAE27903 Q8VHL1 EC 2.1.1.43
AK147667 BAE28059 Q8VHL1 EC 2.1.1.43
AK170161 BAE41607 Q8VHL1 EC 2.1.1.43

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Setd7 NP_542983 R.norvegicus Setd7 689954   NP_001103028 98
H.sapiens SETD7 80854 Gene Info NP_085151 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)