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Gene Info

Gene Information For:Mm. Capza1, capping protein (actin filament) muscle Z-line, alpha 1
Sequence ID:NM_009797
Entrez Gene ID:12340
Ensembl ID:ENSMUSG00000070372

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F2.2|3 55.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 104823001 - 104864390

NM_009797 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12340104625702104628041
23412403104628324104628386
24042475104631444104631515
24762554104637015104637093
25552634104637642104637721
26352841104642699104642905
28422905104643745104643808
29062957104645578104645629
29583021104647835104647898
30223187104667257104667422

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4489604Full LengthBC016232capping protein (actin filament) muscle Z-line, alpha 1
6817308Full LengthBC085506capping protein (actin filament) muscle Z-line, alpha 1
3484905IncompleteBC003915capping protein (actin filament) muscle Z-line, alpha 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033927  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009797 NP_033927 P47753 F-actin_cap_A

Related Sequences

 
mRNAGenPeptSwissProt
U16740 AAC00566 P47753
BC003915 AAH03915 Q99L12
BC016232 AAH16232 P47753
BC085506 AAH85506 Q5RKN9
AK146296 BAE27053 Q3UJV2
AK147049 BAE27635 Q5RKN9
AK149602 BAE28985 Q5RKN9
AK151253 BAE30242 Q3UAS2
AK152364 BAE31154 Q5RKN9
AK163418 BAE37341 Q5RKN9
AK166484 BAE38802 Q3TLJ0
AK166964 BAE39147 Q5RKN9
AK167193 BAE39323 Q5RKN9
AK168916 BAE40729 Q5RKN9
AK169806 BAE41380 Q5RKN9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Capza1 NP_033927 R.norvegicus Capza1 691149   NP_001103095 98
H.sapiens CAPZA1 829 Gene Info NP_006126 97
D.melanogaster cpa 37387   NP_611539 64
A.gambiae AgaP_AGAP006141 1276811   XP_001688794 63
C.elegans cap-1 177497   NP_501145 57
A.thaliana AT3G05520 819717   NP_187203 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)