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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Bnc2, basonuclin 2
Sequence ID:NM_172870
Entrez Gene ID:242509
Ensembl ID:ENSMUSG00000028487

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C4|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 84273213 - 84273932

NM_172870 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
139068391844583922350
390758768393759683939565
587761128403679284037027
611362158406014984060251
621663418420168284201807
634264538432087884320989

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40048720Full LengthBC110483basonuclin 2
40048722Full LengthBC110484basonuclin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766458  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172870 NP_766458   zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
BC110483 AAI10484 Q2TBA5
BC110484 AAI10485 Q2TBA4
AY438375 AAR99388 Q8BMQ3
AK030323 BAC26901 Q8BMQ3
AK031440 BAC27406 Q8C0F6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bnc2 NP_766458 R.norvegicus Bnc2 298189   NP_001100136 98
H.sapiens BNC2 54796 Gene Info NP_060107 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)