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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. S1pr5, Sphingosine-1-phosphate receptor 5
Sequence ID:NM_053190
Entrez Gene ID:94226
Ensembl ID:ENSMUSG00000045087

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 A4

Chromosomal Position (from UCSC)

Chromosomal Position:9: 21243925 - 21245090

NM_053190 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1823042104736021049646
230524612105052021050676
246225122105283621052886

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4194177Full LengthBC012232sphingosine-1-phosphate receptor 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444420  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_053190 NP_444420 Q91X56 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC012232 AAH12232 Q91X56
AF327535 AAK15485 Q91X56
AK081126 BAC38142 Q91X56

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus S1pr5 NP_444420 R.norvegicus S1pr5 60399   NP_068543 96
H.sapiens S1PR5 53637 Gene Info NP_001159687 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)