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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gabpa, GA repeat binding protein, alpha
Sequence ID:NM_008065
Entrez Gene ID:14390
Ensembl ID:ENSMUSG00000008976

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 C3-4|16 55.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 84860973 - 84861593

NM_008065 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14208483536884835787
4215238483932584839427
5246688484157384841717
6697538484452684844610
7549998484636884846613
100011948485270484852898
119512488485670684856759
124913898485727884857418
139015828485762484857816
158349868486061984864022

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3493987Full LengthBC013562GA repeat binding protein, alpha
6408997Full LengthBC052448GA repeat binding protein, alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032091  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008065 NP_032091 Q00422 Ets
SAM_PNT

Related Sequences

 
mRNAGenPeptSwissProt
M74515 AAA53030 Q00422
Q6HAA1
BC013562 AAH13562 Q91YY8
BC052448 AAH52448 Q00422
AY282793 AAQ19478 Q6WJ17
AY282794 AAQ19479 Q6WJ17
AY282795 AAQ19480 Q6WJ17
AY282796 AAQ19481 Q6WJ14
AY282797 AAQ19482 Q6WJ14
AY282798 AAQ19483 Q6WJ14
AY282799 AAQ19484 Q6WJ14
AK004243 BAB23235 Q9CT91
AK139916 BAE24181 Q00422
AK145446 BAE26442 Q00422
AK145838 BAE26687 Q00422
AK148087 BAE28337 Q00422
AK150455 BAE29575 Q00422
FN545817 CBB12675 C7U272

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gabpa NP_032091 R.norvegicus Gabpa 363735   NP_001102311 98
H.sapiens GABPA 2551 Gene Info NP_001184226 96
A.gambiae AgaP_AGAP004337 1274484   XP_313616 45
D.melanogaster Ets97D 43236   NP_524523 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)