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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Emd, emerin
Sequence ID:NM_007927
Entrez Gene ID:13726
Ensembl ID:ENSMUSG00000001964

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X A7.3|X 29.81 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 74254841 - 74257746

NM_007927 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11957150017771500371
1963037150054671500653
3043817150079171500868
3825157150108171501214
5165627150221671502262
56313037150234571503085

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130408Full LengthBC132131emerin
40130410Full LengthBC132133emerin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031953  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007927 NP_031953 Q3UJP3
O08579
LEM

Related Sequences

 
mRNAGenPeptSwissProt
U73902 AAD00238 Q3UJP3
O08579
BC132131 AAI32132 Q3UJP3
BC132133 AAI32134 Q3UJP3
AK146361 BAE27112 Q3UJP3
O08579
AK167852 BAE39870 Q3TIH6
AK168209 BAE40168 Q3THM8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Emd NP_031953 R.norvegicus Emd 25437   NP_037080 94
H.sapiens EMD 2010 Gene Info NP_000108 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)