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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lum, Lumican
Sequence ID:NM_008524
Entrez Gene ID:17022
Ensembl ID:ENSMUSG00000036446

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C3|10 61.0

Chromosomal Position (from UCSC)

Chromosomal Position:10: 97565845 - 97572527

NM_008524 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13859702813497028518
38612689703085797031739
126920759703453097035336

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3585672Full LengthBC005550lumican

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032550  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008524 NP_032550 P51885 LRR_1
LRRNT

Related Sequences

 
mRNAGenPeptSwissProt
S79461 AAB35361 P51885
BC005550 AAH05550 P51885
AK014312 BAB29264 P51885
AK075737 BAC35919 P51885
AK164774 BAE37912 P51885

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lum NP_032550 R.norvegicus Lum 81682   NP_112312 97
H.sapiens LUM 4060 Gene Info NP_002336 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta