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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hpgd, hydroxyprostaglandin dehydrogenase 15 (NAD)
Sequence ID:NM_008278
Entrez Gene ID:15446
Ensembl ID:ENSMUSG00000031613

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 B3.2|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 56294536 - 56295758

NM_008278 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11615877334858773508
1622855877373558773858
2863925877715258777258
3934895878639058786486
4905665879654658796622
5677305879778958797952
73117195879885458799842

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4208980Full LengthBC021157hydroxyprostaglandin dehydrogenase 15 (NAD)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032304  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_008278 NP_032304 Q8VCC1 EC 1.1.1.141 adh_short

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U44389 AAB41825 Q8VCC1 EC 1.1.1.141
BC021157 AAH21157 Q8VCC1 EC 1.1.1.141
AK146038 BAE26850 Q8VCC1 EC 1.1.1.141

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hpgd NP_032304 R.norvegicus Hpgd 79242   NP_077366 94
H.sapiens HPGD 3248 Gene Info NP_000851 90
A.gambiae AgaP_AGAP001753 1281421   XP_321329 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)