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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Stfa2l1, stefin A2 like 1
Sequence ID:NM_173869
Entrez Gene ID:268885
Ensembl ID:ENSMUSG00000059657

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 B3|16

Chromosomal Position (from UCSC)

Chromosomal Position:16: 36156810 - 36161948

NM_173869 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11103615689636157005
1112123616003136160132
2134143616183236162033

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8734103Full LengthBC119354stefin A2 like 1
40126371Full LengthBC117052stefin A2 like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_776294  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_173869 NP_776294 Q8BWM3 Cystatin

Related Sequences

 
mRNAGenPeptSwissProt
BC117052 AAI17053 Q8BWM3
BC119354 AAI19355 Q8BWM3
AY163161 AAO17298 Q811V2
AK050597 BAC34333 Q8BWM3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Stfa2l1 NP_776294 M.musculus Stfa2 20862 Gene Info NP_001076014 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)