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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Acads, acyl-Coenzyme A dehydrogenase, short chain
Sequence ID:NM_007383
Entrez Gene ID:11409
Ensembl ID:ENSMUSG00000029545

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5 55.99 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 115110299 - 115119324

NM_007383 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
44751115560307115561014
752808115561102115561158
809904115561327115561422
9051042115561645115561782
10431213115561865115562035
12141365115562248115562399
13661477115562773115562884
14781627115563072115563221
16281791115567573115567736
17921880115569233115569321

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4913813Full LengthBC016259acyl-Coenzyme A dehydrogenase, short chain
6529149IncompleteBC055063acyl-Coenzyme A dehydrogenase, short chain

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031409  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_007383 NP_031409 Q07417 EC 1.3.8.1 Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L11163 AAA16714 Q07417 EC 1.3.8.1
BC016259 AAH16259 Q07417 EC 1.3.8.1
AK155361 BAE33217 Q07417 EC 1.3.8.1
AK169428 BAE41170 Q07417 EC 1.3.8.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Acads NP_031409 R.norvegicus Acads 64304   NP_071957 98
H.sapiens ACADS 35 Gene Info NP_000008 91
A.gambiae AgaP_AGAP001951 1281174   XP_321112 71
D.melanogaster Arc42 42364   NP_650840 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)