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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pxn, paxillin
Sequence ID:NM_011223
NM_133915
Entrez Gene ID:19303
Ensembl ID:ENSMUSG00000029528

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5 60.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 115506751 - 115554657

 Exon Info From UCSC:
NM_011223
NM_133915

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3583842IncompleteBC003298paxillin
5309957IncompleteBC025493paxillin
100015959BC152794paxillin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598676  NP_035353  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011223 NP_035353   LIM
Paxillin
NM_133915 NP_598676 Q8VI36 LIM
Paxillin

Related Sequences

 
mRNAGenPeptSwissProt
BC003298 AAH03298 Q99LE7
BC152794 AAI52795  
AF293882 AAL71909 Q8VI36
AF293883 AAL71910 Q8VI36
AK148060 BAE28319 Q3UG90
AK149933 BAE29176 Q8VI36
AK167299 BAE39404 Q8VI36
AK171436 BAE42452 Q8VI36

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pxn NP_598676 R.norvegicus Pxn 360820   NP_001012147 97
H.sapiens PXN 5829 Gene Info NP_001074324 94
A.gambiae AgaP_AGAP008532 1277441   XP_316909 54
D.melanogaster Pax 35215   NP_724183 51
C.elegans pxl-1 175831   NP_001122677 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)