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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Synj1, synaptojanin 1
Sequence ID:NM_001045515
NM_001164483
Entrez Gene ID:104015
Ensembl ID:ENSMUSG00000022973

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16|16 C3-C4

Chromosomal Position (from UCSC)

Chromosomal Position:16: 90936100 - 91010170

 Exon Info From UCSC:
NM_001045515
NM_001164483

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001045515 NP_001038980    
NM_001164483 NP_001157955    

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AB093272 BAC41456 Q8CHC4 EC 3.1.3.36

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Synj1 NP_001157955 R.norvegicus Synj1 85238   NP_445928 98
H.sapiens SYNJ1 8867 Gene Info NP_003886 90
D.melanogaster synj 37517   NP_726155 53
A.gambiae AgaP_AGAP012175 1280512   XP_320360 53
C.elegans unc-26 178284   NP_001023266 45
S.cerevisiae INP52 855618   NP_014293 40
S.cerevisiae INP53 854276   NP_014752 39
S.pombe syj1 2540270   NP_596431 37
N.crassa NCU03298 3880624   XP_964475 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta