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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Aqp1, aquaporin 1
Sequence ID:NM_007472
Entrez Gene ID:11826
Ensembl ID:ENSMUSG00000004655

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pineal gland, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 B3|6 27.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 55336431 - 55348555

NM_007472 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15765528629255286867
5777415529539955295563
7428225529580655295886
82327605529661155298548

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3491276Full LengthBC007125aquaporin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031498  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007472 NP_031498 Q02013 MIP

Related Sequences

 
mRNAGenPeptSwissProt
L02914 AAB53928 Q02013
BC007125 AAH07125 Q02013
AK081886 BAC38360 Q02013
AK086688 BAC39719 Q02013
AK157333 BAE34051 Q02013
AK158226 BAE34412 Q02013
AK158389 BAE34482 Q02013
AK166280 BAE38677 Q3TLW5
AK171627 BAE42573 Q02013
AK172361 BAE42966 Q02013

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Aqp1 NP_031498 R.norvegicus Aqp1 25240   NP_036910 98
H.sapiens AQP1 358 Gene Info NP_932766 94
A.gambiae AgaP_AGAP008843 1279813   XP_319585 45
A.thaliana PIP2E 818487   NP_181434 45
D.melanogaster CG7777 36237   NP_610686 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)