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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atp13a1, ATPase type 13A1
Sequence ID:NM_133224
Entrez Gene ID:170759
Ensembl ID:ENSMUSG00000031862

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 B3.3|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 69791233 - 69807745

 Exon Info From UCSC:
NM_133224

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861743Full LengthBC138721ATPase type 13A1
8861744Full LengthBC138722ATPase type 13A1
4951992IncompleteBC078635ATPase type 13A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_573487  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_133224 NP_573487 Q9EPE9 E1-E2_ATPase
Hydrolase

Related Sequences

 
mRNAGenPeptSwissProt
BC049817 AAH49817 Q810K8
BC138721 AAI38722 Q9EPE9
BC138722 AAI38723 Q9EPE9
AB035381 BAB20095 Q9EPE9
AK173270 BAD32548 Q69Z96

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp13a1 NP_573487 R.norvegicus Atp13a1 290673   NP_001099549 98
H.sapiens ATP13A1 57130 Gene Info NP_065143 95
A.gambiae AgaP_AGAP008085 1277866   XP_317372 57
D.melanogaster CG6230 34546   NP_609490 56
C.elegans C10C6.6 178070   NP_502165 55
A.thaliana PDR2 832428   NP_197752 46
N.crassa NCU04898 3874554   XP_958407 45
S.pombe cta4 2542381   NP_593971 43
S.cerevisiae SPF1 856681   NP_010883 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)