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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hdc, histidine decarboxylase
Sequence ID:NM_008230
Entrez Gene ID:15186
Ensembl ID:ENSMUSG00000027360

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E5-G|2 71.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 126593744 - 126618588

 Exon Info From UCSC:
NM_008230

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30044098Full LengthBC052833histidine decarboxylase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032256  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_008230 NP_032256 P23738 EC 4.1.1.22 Pyridoxal_deC

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF109137 AAC95389 P23738 EC 4.1.1.22
BC052833 AAH52833 Q7TMW5  
AK088545 BAC40415 P23738 EC 4.1.1.22
AK133455 BAE21666 P23738 EC 4.1.1.22
AK150168 BAE29356 P23738 EC 4.1.1.22
AK153104 BAE31724 P23738 EC 4.1.1.22
X57437 CAA40685 P23738 EC 4.1.1.22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hdc NP_032256 R.norvegicus Hdc 24443   NP_058712 91
H.sapiens HDC 3067 Gene Info NP_002103 88
A.gambiae AgaP_AGAP009001 1279960   XP_319749 62
D.melanogaster Hdc 36076   NP_523679 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)