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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ehd3, EH-domain containing 3
Sequence ID:NM_020578
Entrez Gene ID:57440
Ensembl ID:ENSMUSG00000024065

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 E2|17 43.25 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 73804871 - 73832088

NM_020578 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16297415418074154808
6308067416557074165746
8079047416981774169914
90513177417648974176901
131814827417738574177549
148336587417925774181432

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6312263Full LengthBC046596EH-domain containing 3
4192395IncompleteBC026392EH-domain containing 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065603  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020578 NP_065603 Q9QXY6 Dynamin_N

Related Sequences

 
mRNAGenPeptSwissProt
AF155883 AAF19020 Q9QXY6
BC026392 AAH26392 Q8R0V6
BC046596 AAH46596 Q9QXY6
AF506002 AAM28633 Q9QXY6
AK141265 BAE24623 Q9QXY6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ehd3 NP_065603 R.norvegicus Ehd3 192249   NP_620245 99
H.sapiens EHD3 30845 Gene Info NP_055415 97
A.thaliana EHD2 825902   NP_567299 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)