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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Mthfd1l, methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
Sequence ID:NM_001170785
NM_001170786
NM_172308
Entrez Gene ID:270685
Ensembl ID:ENSMUSG00000040675

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 A1|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 3973124 - 4155961

 Exon Info From UCSC:
NM_001170785
NM_001170786
NM_172308

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5374413Full LengthBC030437methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
5374413IncompleteBC049936methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_758512  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001170785 NP_001164256      
NM_001170786 NP_001164257      
NM_172308 NP_758512 Q3V3R1 EC 6.3.4.3 THF_DHG_CYH
FTHFS
THF_DHG_CYH_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC030437 AAH30437 Q3V3R1 EC 6.3.4.3
BC049936 AAH49936 Q3V3R1 EC 6.3.4.3
AK038579 BAC30053 Q3V3R1 EC 6.3.4.3
AK028211 BAE20438 Q3V3R1 EC 6.3.4.3
AK036284 BAE20500 Q3V3R1 EC 6.3.4.3
AK160025 BAE35568 Q3V3R1 EC 6.3.4.3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mthfd1l NP_001164256 H.sapiens MTHFD1L 25902 Gene Info NP_001229696 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)