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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Raf1, v-raf-leukemia viral oncogene 1
Sequence ID:NM_029780
Entrez Gene ID:110157
Ensembl ID:ENSMUSG00000000441

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 C3|6 52.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 115618597 - 115620239

 Exon Info From UCSC:
NM_029780

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2645313Full LengthBC092040v-raf-leukemia viral oncogene 1
4222659Full LengthBC015273v-raf-leukemia viral oncogene 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084056  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_029780 NP_084056 Q99N57 EC 2.7.11.1 Pkinase
C1_1
RBD

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC015273 AAH15273 Q99N57 EC 2.7.11.1
BC092040 AAH92040 Q99N57 EC 2.7.11.1
AK018272 BAB31142 Q9CU36  
AB052739 BAB39527 Q99N73  
AB057663 BAB39743 Q99N57 EC 2.7.11.1
AB057655 BAB39748 Q99N57 EC 2.7.11.1
AB077145 BAB83675 Q8VI85  
AK052941 BAC35213 Q8C6X7  
AK085558 BAC39472 Q8C3L4  
AK141745 BAE24820 Q99N57 EC 2.7.11.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Raf1 NP_084056 R.norvegicus Raf1 24703   NP_036771 99
H.sapiens RAF1 5894 Gene Info NP_002871 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta