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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Trim9, tripartite motif-containing 9
Sequence ID:NM_001110202
NM_001110203
NM_053167
Entrez Gene ID:94090
Ensembl ID:ENSMUSG00000021071

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 C3|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 70251115 - 70290365

 Exon Info From UCSC:
NM_001110202
NM_001110203
NM_053167

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5684877Full LengthBC052034tripartite motif-containing 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444397  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001110202 NP_001103672    
NM_001110203 NP_001103673    
NM_053167 NP_444397   fn3
zf-C3HC4
SPRY
zf-B_box

Related Sequences

 
mRNAGenPeptSwissProt
AF220039 AAG53493 Q8C7M3
BC052034 AAH52034 Q8C7M3
AK028280 BAC25854 Q8C7M3
AK047483 BAC33074 Q78TD4
AK048875 BAC33479 Q8C7M3
AK049907 BAC33982 Q8C7M3
AK129109 BAC97919 Q8C7M3
AK136860 BAE23150 Q3UVW9
AK163123 BAE37203 Q3TR28

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Trim9 NP_444397 R.norvegicus Trim9 155812   NP_569104 100
H.sapiens TRIM9 114088 Gene Info NP_055978 98
A.gambiae AgaP_AGAP008750 1275605   XP_314868 50
D.melanogaster Trim9 34453   NP_001188786 48
C.elegans C39F7.2 178619   NP_503395 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)