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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Vamp8, vesicle-associated membrane protein 8
Sequence ID:NM_016794
Entrez Gene ID:22320
Ensembl ID:ENSMUSG00000050732

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 C1|6 31.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 72385370 - 72390542

NM_016794 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14337233521472335646
4345927233825572338413
5937867234046772340660

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4205509Full LengthBC012668vesicle-associated membrane protein 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058074  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016794 NP_058074   Synaptobrevin

Related Sequences

 
mRNAGenPeptSwissProt
AF053724 AAC06371 O70404
AF045661 AAC23665 O70404
BC012668 AAH12668 O70404
AK002268 BAB21977 O70404
AK013279 BAB28766 O70404
AK004178 BAE43163 Q3V4C2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vamp8 NP_058074 R.norvegicus Vamp8 83730   NP_114015 99
H.sapiens VAMP8 8673 Gene Info NP_003752 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)