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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Psmc3ip, proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein
Sequence ID:NM_008949
Entrez Gene ID:19183
Ensembl ID:ENSMUSG00000019303

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 101092206 - 101095387

NM_008949 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16315100953470100953769
316375100953845100953904
376429100954037100954090
430575100954176100954321
576687100954994100955105
688777100956249100956338
778878100956471100956571
879937100956656100956714

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5027493Full LengthBC030169proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032975  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008949 NP_032975 O35047 TBPIP

Related Sequences

 
mRNAGenPeptSwissProt
BC030169 AAH30169 O35047
FJ937966 ACR24246 C4PFH5
FJ937967 ACR24247 C4PFH6
AB000121 BAA23155 O35047
AK133462 BAE21670 O35047

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Psmc3ip NP_032975 R.norvegicus Psmc3ip 140938   NP_604453 95
H.sapiens PSMC3IP 29893 Gene Info NP_057640 88
A.thaliana AHP2 837893   NP_172791 40
S.pombe meu13 3361533   NP_001018191 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)