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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Brdt, Bromodomain, testis-specific
Sequence ID:NM_054054
NM_001079873
Entrez Gene ID:114642
Ensembl ID:ENSMUSG00000029279

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E5|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 107342070 - 107350637

 Exon Info From UCSC:
NM_054054
NM_001079873

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_473395  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001079873 NP_001073342    
NM_054054 NP_473395 Q91Y44 Bromodomain

Related Sequences

 
mRNAGenPeptSwissProt
AF358660 AAK50736 Q91Y44
AK078663 BAC37352 Q8BNZ8
AB208640 BAD91553 Q91Y44

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Brdt NP_473395 H.sapiens BRDT 676 Gene Info NP_001229735 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)