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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Mtpn, myotrophin
Sequence ID:NM_008098
Entrez Gene ID:14489
Ensembl ID:ENSMUSG00000029840

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 B1|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 35510931 - 35539801

NM_008098 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
134943545882335462316
349535783547189935471982
357936923547268135472794
369340423548953835489887

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6417343Full LengthBC043084myotrophin
6839739Full LengthBC054811myotrophin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032124  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008098 NP_032124 P62774 Ank

Related Sequences

 
mRNAGenPeptSwissProt
U20290 AAA86719 P62774
BC043084 AAH43084 P62774
BC054811 AAH54811 P62774
AK002620 BAB22235 P62774
AK028027 BAC25707 P62774
AK049398 BAC33734 P62774
AK083888 BAC39050 P62774
AK132029 BAE20953 P62774
AK145755 BAE26630 P62774
AK146305 BAE27061 P62774
AK146473 BAE27198 P62774
AK150750 BAE29820 P62774
AK151106 BAE30116 P62774
AK151147 BAE30153 P62774
AK151485 BAE30438 P62774
AK151564 BAE30506 P62774
AK151640 BAE30570 P62774
AK151687 BAE30611 P62774
AK152272 BAE31088 P62774

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mtpn NP_032124 R.norvegicus Mtpn 79215   NP_077350 100
H.sapiens MTPN 136319 Gene Info NP_665807 99
D.melanogaster CG31715 318909   NP_723568 53
D.melanogaster CG7423 32894   NP_573347 46
C.elegans C43H6.3 180545   NP_508437 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)