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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Smc1b, structural maintenance of chromosomes 1B
Sequence ID:NM_080470
Entrez Gene ID:140557
Ensembl ID:ENSMUSG00000022432

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15|15 E3

Chromosomal Position (from UCSC)

Chromosomal Position:15: 85064688 - 85131957

 Exon Info From UCSC:
NM_080470

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40048794Full LengthBC129800structural maintenance of chromosomes 1B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_536718  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080470 NP_536718 Q920F6 SMC_N
SMC_hinge

Related Sequences

 
mRNAGenPeptSwissProt
BC129800 AAI29801 A1L2Z0
AF303827 AAL09333 Q920F6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smc1b NP_536718 R.norvegicus Smc1b 300121   NP_001123970 97
H.sapiens SMC1B 27127 Gene Info NP_683515 83
P.falciparum PF11_0317 810864   XP_001347988 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)