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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rnaseh2a, Ribonuclease H2, large subunit
Sequence ID:NM_027187
Entrez Gene ID:69724
Ensembl ID:ENSMUSG00000052926

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C3|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 84957671 - 84966000

NM_027187 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
112558748050887481762
125613798748186487481987
138014678748367487483761
146816058748386587484002
160616938748902987489116
169418208748921587489341
182118928748946987489540
189320448748975887489909

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1493985Full LengthBC038158ribonuclease H2, large subunit
3666709Full LengthBC029252ribonuclease H2, large subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081463  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_027187 NP_081463 Q9CWY8 EC 3.1.26.4 RNase_HII

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC029252 AAH29252 Q05C51  
BC038158 AAH38158 Q9CWY8 EC 3.1.26.4
AK010292 BAB26828 Q9CWY8 EC 3.1.26.4
AK146518 BAE27230 Q9CWY8 EC 3.1.26.4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rnaseh2a NP_081463 R.norvegicus Rnaseh2a 364974   NP_001013252 93
H.sapiens RNASEH2A 10535 Gene Info NP_006388 87
C.elegans rnh-2 266861   NP_495796 54
A.gambiae AgaP_AGAP007741 1278224   XP_317779 52
A.thaliana AT2G25100 817048   NP_565584 51
P.falciparum PFF1150w 3885875   XP_966221 51
D.melanogaster CG13690 33213   NP_608521 50
N.crassa NCU09608 3879521   XP_963372 50
S.pombe rnh201 2541542   NP_593684 48
S.cerevisiae RNH201 855652   NP_014327 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)