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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Apoc1, apolipoprotein C-I
Sequence ID:NM_001110009
NM_007469
Entrez Gene ID:11812
Ensembl ID:ENSMUSG00000040564

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A3|7 4.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 19689484 - 19692573

 Exon Info From UCSC:
NM_001110009
NM_007469

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
875610Full LengthBC094638apolipoprotein C-I
5124986Full LengthBC019398apolipoprotein C-I

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031495  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001110009 NP_001103479    
NM_007469 NP_031495 P34928 ApoC-I

Related Sequences

 
mRNAGenPeptSwissProt
BC019398 AAH19398 P34928
BC094638 AAH94638 P34928
AK011358 BAB27566 P34928

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Apoc1 NP_001103479 R.norvegicus Apoc1 25292   NP_001103466 84
H.sapiens APOC1 341 Gene Info NP_001636 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)