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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rbck1, RanBP-type and C3HC4-type zinc finger containing 1
Sequence ID:NM_001083921
NM_019705
Entrez Gene ID:24105
Ensembl ID:ENSMUSG00000027466

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, peripheral nervous system, pituitary gland, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 G3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 152316333 - 152331102

 Exon Info From UCSC:
NM_001083921
NM_019705

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4192310Full LengthBC034555RanBP-type and C3HC4-type zinc finger containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062679  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001083921 NP_001077390    
NM_019705 NP_062679 Q9WUB0 zf-C3HC4
zf-RanBP

Related Sequences

 
mRNAGenPeptSwissProt
AF124663 AAD24572 Q9WUB0
BC034555 AAH34555 Q9WUB0
AK088591 BAC40440 Q9WUB0
AK166075 BAE38556 Q9WUB0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rbck1 NP_001077390 R.norvegicus Rbck1 60383   NP_068532 97
H.sapiens RBCK1 10616 Gene Info NP_112506 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)