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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Acbd5, acyl-Coenzyme A binding domain containing 5
Sequence ID:NM_001102436
NM_001102437
NM_001102438
NM_028793
Entrez Gene ID:74159
Ensembl ID:ENSMUSG00000026781

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 A3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 23069448 - 23114510

 Exon Info From UCSC:
NM_001102436
NM_001102437
NM_001102438
NM_028793

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5257773Full LengthBC084584acyl-Coenzyme A binding domain containing 5
5355466Full LengthBC061484acyl-Coenzyme A binding domain containing 5
4221563IncompleteBC035202acyl-Coenzyme A binding domain containing 5
6397577IncompleteBC053518acyl-Coenzyme A binding domain containing 5
30646028IncompleteBC090641acyl-Coenzyme A binding domain containing 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083069  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001102436 NP_001095906    
NM_001102437 NP_001095907    
NM_001102438 NP_001095908 Q5XG73  
NM_028793 NP_083069   ACBP

Related Sequences

 
mRNAGenPeptSwissProt
BC035202 AAH35202 Q5XG73
BC053518 AAH53518 Q5XG73
BC061484 AAH61484 Q5XG73
BC084584 AAH84584 Q5XG73
BC090641 AAH90641 Q5CZX6
AK005001 BAB23735 Q5XG73
AK050450 BAC34262 Q5XG73
AK147839 BAE28174 Q5XG73

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Acbd5 NP_001095907 R.norvegicus Acbd5 307170   NP_001071103 92
R.norvegicus LOC679565 679565   XP_001053520 91
H.sapiens ACBD5 91452 Gene Info NP_663736 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)