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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Egr1, early growth response 1
Sequence ID:NM_007913
Entrez Gene ID:13653
Ensembl ID:ENSMUSG00000038418

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 C/D|18 16.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 34861206 - 34864956

NM_007913 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15803502086035021439
58130723502211835024609

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861633Full LengthBC138613early growth response 1
8861635Full LengthBC138615early growth response 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031939  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007913 NP_031939 P08046
Q544D6
zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
M20157 AAA37544 P08046
Q544D6
M19643 AAA39382 P08046
M38174 AAA39383 Q6LDK7
M22326 AAA40416 P08046
Q544D6
BC138613 AAI38614 Q544D6
BC138615 AAI38616 Q544D6
AK037837 BAC29885 Q8CAT6
AK040925 BAC30748 P08046
Q544D6
AK133630 BAE21758 Q3UZU7
AK145198 BAE26289 Q3UM09
AK146322 BAE27077 P08046
Q544D6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Egr1 NP_031939 R.norvegicus Egr1 24330   NP_036683 98
H.sapiens EGR1 1958 Gene Info NP_001955 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta